Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TraipQ8VIG6 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Gm13233-201ENSMUST00000118760 1443 ntBASIC16.11■□□□□ 0.17
TraipQ8VIG6 Gm13244-201ENSMUST00000118855 1446 ntBASIC16.11■□□□□ 0.17
TraipQ8VIG6 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.11■□□□□ 0.17
TraipQ8VIG6 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Mir449b-201ENSMUST00000104833 80 ntBASIC16.11■□□□□ 0.17
TraipQ8VIG6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.11■□□□□ 0.17
TraipQ8VIG6 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.11■□□□□ 0.17
TraipQ8VIG6 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TraipQ8VIG6 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.1■□□□□ 0.17
TraipQ8VIG6 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC16.1■□□□□ 0.17
TraipQ8VIG6 Mir6956-201ENSMUST00000183598 62 ntBASIC16.1■□□□□ 0.17
TraipQ8VIG6 Gm10253-201ENSMUST00000194270 940 ntBASIC16.1■□□□□ 0.17
TraipQ8VIG6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.1■□□□□ 0.17
TraipQ8VIG6 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TraipQ8VIG6 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
TraipQ8VIG6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gm15693-201ENSMUST00000120470 637 ntBASIC16.09■□□□□ 0.17
TraipQ8VIG6 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TraipQ8VIG6 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC16.09■□□□□ 0.17
TraipQ8VIG6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.09■□□□□ 0.17
TraipQ8VIG6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gm10652-201ENSMUST00000199790 2622 ntBASIC16.09■□□□□ 0.17
TraipQ8VIG6 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.09■□□□□ 0.17
TraipQ8VIG6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TraipQ8VIG6 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TraipQ8VIG6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms