Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Gm6433-201ENSMUST00000118634 875 ntBASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Krtap5-1-202ENSMUST00000188274 742 ntBASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rab40cQ8VHQ4 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Gm11355-201ENSMUST00000121120 306 ntBASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rab40cQ8VHQ4 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gm10605-202ENSMUST00000183019 3198 ntBASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gm45058-201ENSMUST00000205810 766 ntBASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab40cQ8VHQ4 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rab40cQ8VHQ4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab40cQ8VHQ4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rab40cQ8VHQ4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab40cQ8VHQ4 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms