Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Nup35Q8R4R6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup35Q8R4R6 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup35Q8R4R6 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup35Q8R4R6 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.4□□□□□ -0.43
Nup35Q8R4R6 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Nup35Q8R4R6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Nup35Q8R4R6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Gm8668-201ENSMUST00000120559 1447 ntBASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Gm6623-201ENSMUST00000173570 544 ntBASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Nup35Q8R4R6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Gm19164-201ENSMUST00000210667 640 ntBASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup35Q8R4R6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Nup35Q8R4R6 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms