Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Chrna3Q8R4G9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Gm13597-201ENSMUST00000121239 375 ntBASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Chrna3Q8R4G9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chrna3Q8R4G9 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chrna3Q8R4G9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms