Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.51□□□□□ -0.09
CroccQ8CJ40 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CroccQ8CJ40 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CroccQ8CJ40 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CroccQ8CJ40 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Gm7461-201ENSMUST00000058918 827 ntBASIC14.5□□□□□ -0.09
CroccQ8CJ40 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.5□□□□□ -0.09
CroccQ8CJ40 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CroccQ8CJ40 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gm13884-201ENSMUST00000118103 829 ntBASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gm18489-201ENSMUST00000172565 551 ntBASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.49□□□□□ -0.09
CroccQ8CJ40 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
CroccQ8CJ40 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.49□□□□□ -0.09
CroccQ8CJ40 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.48□□□□□ -0.09
CroccQ8CJ40 Gm27301-201ENSMUST00000184012 127 ntBASIC14.48□□□□□ -0.09
CroccQ8CJ40 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Gm18195-201ENSMUST00000207604 706 ntBASIC14.48□□□□□ -0.09
CroccQ8CJ40 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.48□□□□□ -0.09
CroccQ8CJ40 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CroccQ8CJ40 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms