Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Gm12895-201ENSMUST00000122214 226 ntBASIC18.79■□□□□ 0.6
Smc5Q8CG46 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Smc5Q8CG46 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Gm12008-201ENSMUST00000117791 755 ntBASIC18.78■□□□□ 0.6
Smc5Q8CG46 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smc5Q8CG46 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc5Q8CG46 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Gm10499-201ENSMUST00000174094 934 ntBASIC18.77■□□□□ 0.6
Smc5Q8CG46 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Mxra8os-201ENSMUST00000097740 687 ntBASIC18.77■□□□□ 0.6
Smc5Q8CG46 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc5Q8CG46 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc5Q8CG46 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Gm6296-201ENSMUST00000222599 943 ntBASIC18.76■□□□□ 0.59
Smc5Q8CG46 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc5Q8CG46 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Gm7284-201ENSMUST00000131667 944 ntBASIC18.75■□□□□ 0.59
Smc5Q8CG46 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Gm11780-201ENSMUST00000136880 516 ntBASIC18.75■□□□□ 0.59
Smc5Q8CG46 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.75■□□□□ 0.59
Smc5Q8CG46 Cmtm5-203ENSMUST00000227441 610 ntBASIC18.75■□□□□ 0.59
Smc5Q8CG46 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc5Q8CG46 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smc5Q8CG46 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms