Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Rab11fip4Q8BQP8 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rab11fip4Q8BQP8 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rab11fip4Q8BQP8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Rab11fip4Q8BQP8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rab11fip4Q8BQP8 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rab11fip4Q8BQP8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Rab11fip4Q8BQP8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Rab11fip4Q8BQP8 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Gm25925-201ENSMUST00000158314 306 ntBASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Gm6736-201ENSMUST00000166583 948 ntBASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Rab11fip4Q8BQP8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Gm27646-201ENSMUST00000183989 110 ntBASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Gm27702-201ENSMUST00000184512 56 ntBASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Ptprs-211ENSMUST00000223859 5588 ntBASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab11fip4Q8BQP8 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip4Q8BQP8 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rab11fip4Q8BQP8 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab11fip4Q8BQP8 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms