Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
ShbQ6PD21 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
ShbQ6PD21 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
ShbQ6PD21 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.22■□□□□ 0.19
ShbQ6PD21 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
ShbQ6PD21 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
ShbQ6PD21 Gm13392-201ENSMUST00000117708 150 ntBASIC16.21■□□□□ 0.19
ShbQ6PD21 Gm12341-201ENSMUST00000119724 503 ntBASIC16.21■□□□□ 0.19
ShbQ6PD21 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC16.21■□□□□ 0.19
ShbQ6PD21 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
ShbQ6PD21 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
ShbQ6PD21 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.21■□□□□ 0.19
ShbQ6PD21 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.21■□□□□ 0.19
ShbQ6PD21 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ShbQ6PD21 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ShbQ6PD21 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ShbQ6PD21 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC16.2■□□□□ 0.18
ShbQ6PD21 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
ShbQ6PD21 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
ShbQ6PD21 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC16.2■□□□□ 0.18
ShbQ6PD21 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC16.2■□□□□ 0.18
ShbQ6PD21 Gm5354-201ENSMUST00000182417 973 ntBASIC16.2■□□□□ 0.18
ShbQ6PD21 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.2■□□□□ 0.18
ShbQ6PD21 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ShbQ6PD21 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Mir1247-201ENSMUST00000116706 82 ntBASIC16.19■□□□□ 0.18
ShbQ6PD21 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC16.19■□□□□ 0.18
ShbQ6PD21 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ShbQ6PD21 Gm6944-201ENSMUST00000182449 1006 ntBASIC16.19■□□□□ 0.18
ShbQ6PD21 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.19■□□□□ 0.18
ShbQ6PD21 AC121804.3-201ENSMUST00000223420 295 ntBASIC16.19■□□□□ 0.18
ShbQ6PD21 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.19■□□□□ 0.18
ShbQ6PD21 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC16.19■□□□□ 0.18
ShbQ6PD21 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ShbQ6PD21 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShbQ6PD21 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ShbQ6PD21 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShbQ6PD21 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ShbQ6PD21 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms