Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Gm6296-201ENSMUST00000222599 943 ntBASIC14.84□□□□□ -0.03
Six3Q62233 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six3Q62233 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Six3Q62233 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Six3Q62233 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Six3Q62233 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Six3Q62233 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Six3Q62233 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.84□□□□□ -0.03
Six3Q62233 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Six3Q62233 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Six3Q62233 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Six3Q62233 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Six3Q62233 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Six3Q62233 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Six3Q62233 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Six3Q62233 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.83□□□□□ -0.04
Six3Q62233 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.83□□□□□ -0.04
Six3Q62233 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.83□□□□□ -0.04
Six3Q62233 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC14.83□□□□□ -0.04
Six3Q62233 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Six3Q62233 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Six3Q62233 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Six3Q62233 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Six3Q62233 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Six3Q62233 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Six3Q62233 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.82□□□□□ -0.04
Six3Q62233 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.82□□□□□ -0.04
Six3Q62233 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Six3Q62233 Gm28033-201ENSMUST00000184224 96 ntBASIC14.82□□□□□ -0.04
Six3Q62233 Gm13830-205ENSMUST00000201195 1155 ntBASIC14.82□□□□□ -0.04
Six3Q62233 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.82□□□□□ -0.04
Six3Q62233 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.82□□□□□ -0.04
Six3Q62233 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Six3Q62233 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Six3Q62233 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.82□□□□□ -0.04
Six3Q62233 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Six3Q62233 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.82□□□□□ -0.04
Six3Q62233 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.82□□□□□ -0.04
Six3Q62233 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Six3Q62233 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Six3Q62233 Gm45293-201ENSMUST00000209754 1812 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Six3Q62233 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Six3Q62233 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC14.81□□□□□ -0.04
Six3Q62233 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.81□□□□□ -0.04
Six3Q62233 Gm44357-201ENSMUST00000195897 142 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm19658-201ENSMUST00000196231 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44367-201ENSMUST00000196836 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44350-201ENSMUST00000197197 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44390-201ENSMUST00000197533 144 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44313-201ENSMUST00000198018 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44486-201ENSMUST00000198508 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44314-201ENSMUST00000199263 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44394-201ENSMUST00000199558 138 ntBASIC14.81□□□□□ -0.04
Six3Q62233 Gm44484-201ENSMUST00000199873 138 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms