Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Notch3Q61982 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.69□□□□□ -0.54
Notch3Q61982 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.69□□□□□ -0.54
Notch3Q61982 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.69□□□□□ -0.54
Notch3Q61982 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Notch3Q61982 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 AC119177.1-201ENSMUST00000227647 1332 ntBASIC11.69□□□□□ -0.54
Notch3Q61982 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Notch3Q61982 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Notch3Q61982 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.69□□□□□ -0.54
Notch3Q61982 Gm5177-201ENSMUST00000183092 997 ntBASIC11.69□□□□□ -0.54
Notch3Q61982 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.69□□□□□ -0.54
Notch3Q61982 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Haglr-201ENSMUST00000100000 2085 ntBASIC11.69□□□□□ -0.54
Notch3Q61982 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Notch3Q61982 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.69□□□□□ -0.54
Notch3Q61982 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Notch3Q61982 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC11.68□□□□□ -0.54
Notch3Q61982 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
Notch3Q61982 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC11.68□□□□□ -0.54
Notch3Q61982 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.68□□□□□ -0.54
Notch3Q61982 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Notch3Q61982 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Notch3Q61982 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Notch3Q61982 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Notch3Q61982 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Notch3Q61982 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Gm13616-201ENSMUST00000120600 222 ntBASIC11.68□□□□□ -0.54
Notch3Q61982 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.68□□□□□ -0.54
Notch3Q61982 AC117588.1-201ENSMUST00000228510 999 ntBASIC11.68□□□□□ -0.54
Notch3Q61982 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Notch3Q61982 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms