Protein–RNA interactions for Protein: Q61179

Irf9, Interferon regulatory factor 9, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf9Q61179 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Irf9Q61179 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Irf9Q61179 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Irf9Q61179 AC131743.5-201ENSMUST00000220775 1618 ntBASIC18.82■□□□□ 0.6
Irf9Q61179 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Irf9Q61179 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Irf9Q61179 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.81■□□□□ 0.6
Irf9Q61179 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC18.81■□□□□ 0.6
Irf9Q61179 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC18.81■□□□□ 0.6
Irf9Q61179 Gm15483-201ENSMUST00000120338 456 ntBASIC18.81■□□□□ 0.6
Irf9Q61179 Gm13616-201ENSMUST00000120600 222 ntBASIC18.81■□□□□ 0.6
Irf9Q61179 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
Irf9Q61179 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Irf9Q61179 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Irf9Q61179 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Irf9Q61179 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Gm15920-201ENSMUST00000118998 402 ntBASIC18.8■□□□□ 0.6
Irf9Q61179 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.8■□□□□ 0.6
Irf9Q61179 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 AC140397.2-201ENSMUST00000224213 834 ntBASIC18.8■□□□□ 0.6
Irf9Q61179 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC18.8■□□□□ 0.6
Irf9Q61179 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Irf9Q61179 Gm42918-201ENSMUST00000199249 1580 ntBASIC18.8■□□□□ 0.6
Irf9Q61179 Gm8096-201ENSMUST00000209921 1591 ntBASIC18.8■□□□□ 0.6
Irf9Q61179 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Irf9Q61179 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Irf9Q61179 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Irf9Q61179 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC18.79■□□□□ 0.6
Irf9Q61179 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Irf9Q61179 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Irf9Q61179 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Irf9Q61179 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.78■□□□□ 0.6
Irf9Q61179 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Irf9Q61179 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.78■□□□□ 0.6
Irf9Q61179 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Irf9Q61179 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Irf9Q61179 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms