Protein–RNA interactions for Protein: Q60855

Ripk1, Receptor-interacting serine/threonine-protein kinase 1, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ripk1Q60855 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Ripk1Q60855 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ripk1Q60855 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ripk1Q60855 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ripk1Q60855 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Ripk1Q60855 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ripk1Q60855 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 BC037039-201ENSMUST00000192003 2205 ntBASIC14.33□□□□□ -0.12
Ripk1Q60855 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC14.33□□□□□ -0.12
Ripk1Q60855 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Gm7556-201ENSMUST00000201178 1084 ntBASIC14.33□□□□□ -0.12
Ripk1Q60855 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.33□□□□□ -0.12
Ripk1Q60855 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.33□□□□□ -0.12
Ripk1Q60855 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.33□□□□□ -0.12
Ripk1Q60855 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ripk1Q60855 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ripk1Q60855 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ripk1Q60855 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.32□□□□□ -0.12
Ripk1Q60855 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ripk1Q60855 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ripk1Q60855 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.32□□□□□ -0.12
Ripk1Q60855 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Ripk1Q60855 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.32□□□□□ -0.12
Ripk1Q60855 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Rps4l-201ENSMUST00000071745 943 ntBASIC14.32□□□□□ -0.12
Ripk1Q60855 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ripk1Q60855 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ripk1Q60855 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ripk1Q60855 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ripk1Q60855 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ripk1Q60855 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms