Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav6-3Q5R1E6 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav6-3Q5R1E6 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gm12644-201ENSMUST00000119935 606 ntBASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gm12134-201ENSMUST00000122109 520 ntBASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Trav6-3Q5R1E6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Trav6-3Q5R1E6 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms