Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm7507-201ENSMUST00000183053 1008 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm7556-201ENSMUST00000201178 1084 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm21559-201ENSMUST00000220638 855 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm8587-201ENSMUST00000076538 843 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm10812-201ENSMUST00000099864 546 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC159649.2-201ENSMUST00000222984 3223 ntBASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm12669-201ENSMUST00000122162 1009 ntBASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm25406-201ENSMUST00000157599 105 ntBASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm18959-201ENSMUST00000208954 655 ntBASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gm13559-201ENSMUST00000120476 863 ntBASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC11.8□□□□□ -0.52
Trav15-1-dv6-1Q5R1D2 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms