Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm42918-201ENSMUST00000199249 1580 ntBASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 AC166341.4-201ENSMUST00000220625 123 ntBASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Trim41Q5NCC3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Gm12138-201ENSMUST00000122180 951 ntBASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Trim41Q5NCC3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Trim41Q5NCC3 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Trim41Q5NCC3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 AC124732.1-201ENSMUST00000221551 910 ntBASIC26.2■■□□□ 1.78
Trim41Q5NCC3 AC154239.3-201ENSMUST00000226933 674 ntBASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Trim41Q5NCC3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Gm15824-201ENSMUST00000119516 955 ntBASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Gm6266-201ENSMUST00000203844 806 ntBASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Trim41Q5NCC3 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Gm23984-201ENSMUST00000157139 203 ntBASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Gm18737-201ENSMUST00000173594 937 ntBASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Trim41Q5NCC3 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Gm2810-201ENSMUST00000118681 990 ntBASIC26.17■■□□□ 1.78
Trim41Q5NCC3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trim41Q5NCC3 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Gm45059-201ENSMUST00000205558 1077 ntBASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC26.16■■□□□ 1.78
Trim41Q5NCC3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms