Protein–RNA interactions for Protein: Q571C7

Bdp1, Transcription factor TFIIIB component B'' homolog, mousemouse

Predictions only

Length 2,467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bdp1Q571C7 Gm10766-202ENSMUST00000194123 606 ntBASIC15.31■□□□□ 0.04
Bdp1Q571C7 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Bdp1Q571C7 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Bdp1Q571C7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.3■□□□□ 0.04
Bdp1Q571C7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Gm12341-201ENSMUST00000119724 503 ntBASIC15.3■□□□□ 0.04
Bdp1Q571C7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Gm18054-201ENSMUST00000207539 555 ntBASIC15.3■□□□□ 0.04
Bdp1Q571C7 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.3■□□□□ 0.04
Bdp1Q571C7 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.3■□□□□ 0.04
Bdp1Q571C7 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm8565-201ENSMUST00000183259 1014 ntBASIC15.29■□□□□ 0.04
Bdp1Q571C7 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Bdp1Q571C7 Gm23931-201ENSMUST00000103842 109 ntBASIC15.28■□□□□ 0.04
Bdp1Q571C7 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.28■□□□□ 0.04
Bdp1Q571C7 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Gm24526-201ENSMUST00000082921 158 ntBASIC15.28■□□□□ 0.04
Bdp1Q571C7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Bdp1Q571C7 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Bdp1Q571C7 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Bdp1Q571C7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Bdp1Q571C7 Gm7584-201ENSMUST00000175829 940 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms