Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
R3hdm4Q4VBF2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Gm4995-201ENSMUST00000117247 432 ntBASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Gm12008-201ENSMUST00000117791 755 ntBASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Gm5177-201ENSMUST00000183092 997 ntBASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 AC159295.1-201ENSMUST00000225326 940 ntBASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
R3hdm4Q4VBF2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
R3hdm4Q4VBF2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
R3hdm4Q4VBF2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
R3hdm4Q4VBF2 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
R3hdm4Q4VBF2 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
R3hdm4Q4VBF2 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
R3hdm4Q4VBF2 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Gm5264-201ENSMUST00000190584 848 ntBASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
R3hdm4Q4VBF2 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Gm8000-201ENSMUST00000188378 592 ntBASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Gm45747-201ENSMUST00000212203 999 ntBASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Sybu-209ENSMUST00000228639 4113 ntBASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
R3hdm4Q4VBF2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Gm10175-201ENSMUST00000086013 645 ntBASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
R3hdm4Q4VBF2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms