Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Gm27525-201ENSMUST00000184465 107 ntBASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Gm18206-201ENSMUST00000207027 926 ntBASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nhlrc4Q3UP44 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Gm43767-201ENSMUST00000198933 381 ntBASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nhlrc4Q3UP44 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Gm9727-201ENSMUST00000161387 555 ntBASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nhlrc4Q3UP44 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Gm12008-201ENSMUST00000117791 755 ntBASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Gm17968-201ENSMUST00000194902 784 ntBASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nhlrc4Q3UP44 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms