Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm42900-201ENSMUST00000197184 2167 ntBASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm12846-201ENSMUST00000120431 1373 ntBASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm14381-201ENSMUST00000122105 414 ntBASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
Ush2AQ2QI47 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm22331-201ENSMUST00000158066 136 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm5479-201ENSMUST00000160578 435 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm37835-201ENSMUST00000193305 361 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm5279-201ENSMUST00000199575 745 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 AC169036.1-201ENSMUST00000227994 296 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm11331-201ENSMUST00000119764 288 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm20482-202ENSMUST00000174729 825 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm45219-201ENSMUST00000205602 465 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm14017-201ENSMUST00000121934 386 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm27682-201ENSMUST00000183930 110 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Snora73a-201ENSMUST00000082453 205 ntBASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Ush2AQ2QI47 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm45774-201ENSMUST00000211992 2665 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm2639-201ENSMUST00000156881 1297 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm15429-201ENSMUST00000151268 798 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Gm5620-201ENSMUST00000077991 1348 ntBASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Ush2AQ2QI47 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms