Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim43cP86449 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trim43cP86449 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.5■□□□□ 0.23
Trim43cP86449 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Gm18246-201ENSMUST00000221023 728 ntBASIC16.5■□□□□ 0.23
Trim43cP86449 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.5■□□□□ 0.23
Trim43cP86449 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Trim43cP86449 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trim43cP86449 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.5■□□□□ 0.23
Trim43cP86449 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.5■□□□□ 0.23
Trim43cP86449 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trim43cP86449 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.5■□□□□ 0.23
Trim43cP86449 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Trim43cP86449 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
Trim43cP86449 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim43cP86449 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.49■□□□□ 0.23
Trim43cP86449 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.49■□□□□ 0.23
Trim43cP86449 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.49■□□□□ 0.23
Trim43cP86449 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim43cP86449 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim43cP86449 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.48■□□□□ 0.23
Trim43cP86449 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim43cP86449 Efs-202ENSMUST00000227037 2540 ntBASIC16.48■□□□□ 0.23
Trim43cP86449 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim43cP86449 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Gm7787-201ENSMUST00000216858 688 ntBASIC16.48■□□□□ 0.23
Trim43cP86449 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim43cP86449 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim43cP86449 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim43cP86449 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
Trim43cP86449 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Trim43cP86449 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC16.47■□□□□ 0.23
Trim43cP86449 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim43cP86449 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim43cP86449 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms