Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.325e-7■■□□□ 11.4
NCBP2P52298 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.365e-7■■□□□ 11.4
NCBP2P52298 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.78□□□□□ -0.365e-7■■□□□ 11.4
NCBP2P52298 DSN1-208ENST00000473615 2075 ntTSL 211.39□□□□□ -0.595e-7■■□□□ 11.4
NCBP2P52298 DSN1-209ENST00000480153 2447 ntTSL 1 (best)10.89□□□□□ -0.675e-7■■□□□ 11.4
NCBP2P52298 DSN1-202ENST00000373740 1922 ntAPPRIS ALT2 TSL 3 BASIC9.19□□□□□ -0.945e-7■■□□□ 11.4
NCBP2P52298 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC7.23□□□□□ -1.254e-7■■□□□ 11.4
NCBP2P52298 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.93□□□□□ -1.464e-7■■□□□ 11.4
NCBP2P52298 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.63■□□□□ 0.099e-11■■□□□ 11.4
NCBP2P52298 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.119e-11■■□□□ 11.4
NCBP2P52298 RTKN-207ENST00000472518 1105 ntTSL 1 (best)12.7□□□□□ -0.389e-11■■□□□ 11.4
NCBP2P52298 AC074117.1-202ENST00000453289 536 ntTSL 312.03□□□□□ -0.489e-11■■□□□ 11.4
NCBP2P52298 AC074117.1-203ENST00000412749 399 ntTSL 3 BASIC7.55□□□□□ -1.29e-11■■□□□ 11.4
NCBP2P52298 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.232e-9■■□□□ 11.4
NCBP2P52298 SAR1A-203ENST00000373239 468 ntTSL 312.69□□□□□ -0.382e-9■■□□□ 11.4
NCBP2P52298 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.972e-9■■□□□ 11.4
NCBP2P52298 HMGB2-204ENST00000506267 629 ntTSL 320.66■□□□□ 0.94e-9■■□□□ 11.4
NCBP2P52298 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.141e-9■■□□□ 11.4
NCBP2P52298 HMGB2-205ENST00000511316 1841 ntTSL 211.89□□□□□ -0.511e-9■■□□□ 11.4
NCBP2P52298 HMGB2-201ENST00000296503 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.621e-9■■□□□ 11.4
NCBP2P52298 SLC6A8-208ENST00000467402 308 ntTSL 510.73□□□□□ -0.691e-12■■□□□ 11.4
NCBP2P52298 METTL3-210ENST00000543235 2124 ntTSL 513.42□□□□□ -0.261e-9■■□□□ 11.4
NCBP2P52298 METTL3-214ENST00000545788 545 ntTSL 213.05□□□□□ -0.321e-9■■□□□ 11.4
NCBP2P52298 METTL3-209ENST00000542054 975 ntTSL 212.68□□□□□ -0.381e-9■■□□□ 11.4
NCBP2P52298 METTL3-201ENST00000298717 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.461e-9■■□□□ 11.4
NCBP2P52298 METTL3-211ENST00000544248 1570 ntTSL 512.05□□□□□ -0.481e-9■■□□□ 11.4
NCBP2P52298 METTL3-205ENST00000536201 1592 ntTSL 211.96□□□□□ -0.51e-9■■□□□ 11.4
NCBP2P52298 METTL3-206ENST00000537163 2030 ntTSL 511.38□□□□□ -0.591e-9■■□□□ 11.4
NCBP2P52298 METTL3-202ENST00000367606 802 ntTSL 410.88□□□□□ -0.671e-9■■□□□ 11.4
NCBP2P52298 METTL3-213ENST00000545319 563 ntTSL 49.72□□□□□ -0.851e-9■■□□□ 11.4
NCBP2P52298 METTL3-207ENST00000538267 1553 ntTSL 29.59□□□□□ -0.871e-9■■□□□ 11.4
NCBP2P52298 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.763e-6■■□□□ 11.4
NCBP2P52298 FAM193B-211ENST00000508298 479 ntTSL 517.18■□□□□ 0.343e-6■■□□□ 11.4
NCBP2P52298 FAM193B-210ENST00000507587 825 ntTSL 216.63■□□□□ 0.253e-6■■□□□ 11.4
NCBP2P52298 FAM193B-208ENST00000506955 4604 ntTSL 1 (best)15.65■□□□□ 0.13e-6■■□□□ 11.4
NCBP2P52298 FAM193B-213ENST00000510429 839 ntTSL 315.29■□□□□ 0.043e-6■■□□□ 11.4
NCBP2P52298 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.145e-6■■□□□ 11.4
NCBP2P52298 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.145e-6■■□□□ 11.4
NCBP2P52298 EEF1D-239ENST00000531670 926 ntTSL 313.71□□□□□ -0.216e-7■■□□□ 11.4
NCBP2P52298 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.737e-11■■□□□ 11.4
NCBP2P52298 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.024e-9■■□□□ 11.4
NCBP2P52298 BRD2-213ENST00000495733 3404 ntTSL 213.52□□□□□ -0.254e-9■■□□□ 11.4
NCBP2P52298 BRD2-212ENST00000482914 4834 ntTSL 1 (best)13.52□□□□□ -0.254e-9■■□□□ 11.4
NCBP2P52298 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)12.08□□□□□ -0.484e-9■■□□□ 11.4
NCBP2P52298 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.733e-10■■□□□ 11.4
NCBP2P52298 MAFG-203ENST00000574686 570 ntTSL 520.59■□□□□ 0.893e-10■■□□□ 11.4
NCBP2P52298 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.533e-10■■□□□ 11.4
NCBP2P52298 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.173e-10■■□□□ 11.4
NCBP2P52298 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC12.45□□□□□ -0.423e-10■■□□□ 11.4
NCBP2P52298 NIF3L1-201ENST00000359683 1626 ntTSL 1 (best) BASIC11.6□□□□□ -0.553e-10■■□□□ 11.4
NCBP2P52298 NIF3L1-204ENST00000409357 1679 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.893e-10■■□□□ 11.4
NCBP2P52298 NIF3L1-202ENST00000409020 1680 ntAPPRIS P1 TSL 5 BASIC8.77□□□□□ -1.013e-10■■□□□ 11.4
NCBP2P52298 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.033e-10■■□□□ 11.4
NCBP2P52298 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC8.44□□□□□ -1.063e-10■■□□□ 11.4
NCBP2P52298 NIF3L1-203ENST00000409129 813 ntTSL 58.25□□□□□ -1.093e-10■■□□□ 11.4
NCBP2P52298 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.093e-10■■□□□ 11.4
NCBP2P52298 NIF3L1-209ENST00000454952 719 ntTSL 57.2□□□□□ -1.263e-10■■□□□ 11.4
NCBP2P52298 NIF3L1-207ENST00000426253 749 ntTSL 55.6□□□□□ -1.513e-10■■□□□ 11.4
NCBP2P52298 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.73e-10■■□□□ 11.4
NCBP2P52298 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.817e-9■□□□□ 11.3
NCBP2P52298 LAMTOR1-206ENST00000541403 566 ntTSL 216.28■□□□□ 0.27e-9■□□□□ 11.3
NCBP2P52298 LAMTOR1-203ENST00000535872 899 ntTSL 512.96□□□□□ -0.337e-9■□□□□ 11.3
NCBP2P52298 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC10.15□□□□□ -0.787e-9■□□□□ 11.3
NCBP2P52298 LAMTOR1-204ENST00000538404 1346 ntTSL 2 BASIC10.07□□□□□ -0.87e-9■□□□□ 11.3
NCBP2P52298 LAMTOR1-202ENST00000535107 619 ntTSL 3 BASIC9.84□□□□□ -0.837e-9■□□□□ 11.3
NCBP2P52298 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.23■□□□□ 0.031e-43■□□□□ 11.3
NCBP2P52298 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.46□□□□□ -0.251e-43■□□□□ 11.3
NCBP2P52298 HNRNPH1-249ENST00000524180 997 ntTSL 513.22□□□□□ -0.291e-43■□□□□ 11.3
NCBP2P52298 HNRNPH1-218ENST00000510678 1996 ntTSL 512.98□□□□□ -0.331e-43■□□□□ 11.3
NCBP2P52298 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.41□□□□□ -0.421e-43■□□□□ 11.3
NCBP2P52298 TBCK-215ENST00000509532 848 ntTSL 510.87□□□□□ -0.674e-15■□□□□ 11.3
NCBP2P52298 TBCK-204ENST00000394708 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.74e-15■□□□□ 11.3
NCBP2P52298 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC9.23□□□□□ -0.934e-15■□□□□ 11.3
NCBP2P52298 TBCK-213ENST00000507696 579 ntTSL 59.22□□□□□ -0.934e-15■□□□□ 11.3
NCBP2P52298 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC8.7□□□□□ -1.024e-15■□□□□ 11.3
NCBP2P52298 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.044e-15■□□□□ 11.3
NCBP2P52298 TBCK-206ENST00000467183 3566 ntTSL 1 (best)8.09□□□□□ -1.114e-15■□□□□ 11.3
NCBP2P52298 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.574e-15■□□□□ 11.3
NCBP2P52298 MPP5-203ENST00000554911 363 ntTSL 325.47■■□□□ 1.671e-6■□□□□ 11.3
NCBP2P52298 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.61■■□□□ 1.051e-6■□□□□ 11.3
NCBP2P52298 MPP5-207ENST00000557783 567 ntTSL 418.45■□□□□ 0.541e-6■□□□□ 11.3
NCBP2P52298 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.431e-6■□□□□ 11.3
NCBP2P52298 MPP5-202ENST00000554208 2458 ntTSL 217.4■□□□□ 0.381e-6■□□□□ 11.3
NCBP2P52298 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC4.91□□□□□ -1.621e-6■□□□□ 11.3
NCBP2P52298 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.273e-6■□□□□ 11.3
NCBP2P52298 RABGEF1-211ENST00000503687 4139 ntTSL 212.29□□□□□ -0.448e-8■□□□□ 11.3
NCBP2P52298 LAMB1-205ENST00000439976 703 ntTSL 514.47□□□□□ -0.091e-15■□□□□ 11.3
NCBP2P52298 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.271e-15■□□□□ 11.3
NCBP2P52298 LAMB1-202ENST00000393559 550 ntTSL 212.89□□□□□ -0.351e-15■□□□□ 11.3
NCBP2P52298 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC9.6□□□□□ -0.871e-15■□□□□ 11.3
NCBP2P52298 JPX-213ENST00000640437 1620 ntTSL 516.04■□□□□ 0.167e-8■□□□□ 11.3
NCBP2P52298 JPX-207ENST00000602772 1692 ntTSL 1 (best) BASIC10.98□□□□□ -0.657e-8■□□□□ 11.3
NCBP2P52298 JPX-201ENST00000414209 2194 ntTSL 2 BASIC9.61□□□□□ -0.877e-8■□□□□ 11.3
NCBP2P52298 JPX-206ENST00000602737 544 ntTSL 39.35□□□□□ -0.917e-8■□□□□ 11.3
NCBP2P52298 JPX_1.1-201ENST00000614715 135 ntBASIC9.21□□□□□ -0.947e-8■□□□□ 11.3
NCBP2P52298 JPX-205ENST00000602546 762 ntTSL 39.21□□□□□ -0.947e-8■□□□□ 11.3
NCBP2P52298 JPX-208ENST00000602895 829 ntTSL 39.16□□□□□ -0.947e-8■□□□□ 11.3
NCBP2P52298 JPX-209ENST00000602920 625 ntTSL 28.65□□□□□ -1.027e-8■□□□□ 11.3
NCBP2P52298 JPX-210ENST00000602938 581 ntTSL 27.86□□□□□ -1.157e-8■□□□□ 11.3
NCBP2P52298 JPX-204ENST00000602294 502 ntTSL 27.25□□□□□ -1.257e-8■□□□□ 11.3
Retrieved 100 of 18,329 protein–RNA pairs in 235.6 ms