Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.05■□□□□ 0.32
Sdc2P43407 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Sdc2P43407 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.05■□□□□ 0.32
Sdc2P43407 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sdc2P43407 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sdc2P43407 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Sdc2P43407 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Sdc2P43407 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC17.04■□□□□ 0.32
Sdc2P43407 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC17.04■□□□□ 0.32
Sdc2P43407 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Gm45133-201ENSMUST00000207548 2773 ntBASIC17.04■□□□□ 0.32
Sdc2P43407 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sdc2P43407 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdc2P43407 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdc2P43407 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC17.03■□□□□ 0.32
Sdc2P43407 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdc2P43407 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.03■□□□□ 0.32
Sdc2P43407 Gm8318-201ENSMUST00000182954 872 ntBASIC17.03■□□□□ 0.32
Sdc2P43407 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.03■□□□□ 0.32
Sdc2P43407 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Gm8242-201ENSMUST00000193029 1420 ntBASIC17.03■□□□□ 0.32
Sdc2P43407 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Sdc2P43407 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.03■□□□□ 0.32
Sdc2P43407 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.02■□□□□ 0.32
Sdc2P43407 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sdc2P43407 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Sdc2P43407 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC17.02■□□□□ 0.32
Sdc2P43407 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Sdc2P43407 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sdc2P43407 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Sdc2P43407 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Sdc2P43407 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.31
Sdc2P43407 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Sdc2P43407 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
Sdc2P43407 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Sdc2P43407 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.01■□□□□ 0.31
Sdc2P43407 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sdc2P43407 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms