Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Rom1P32958 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
Rom1P32958 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rom1P32958 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rom1P32958 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rom1P32958 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Rom1P32958 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rom1P32958 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.02□□□□□ -0.49
Rom1P32958 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC12.02□□□□□ -0.49
Rom1P32958 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC12.02□□□□□ -0.49
Rom1P32958 Gm27389-201ENSMUST00000183622 195 ntBASIC12.02□□□□□ -0.49
Rom1P32958 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.02□□□□□ -0.49
Rom1P32958 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rom1P32958 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC12.02□□□□□ -0.49
Rom1P32958 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Rom1P32958 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Rom1P32958 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Rom1P32958 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Rom1P32958 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.01□□□□□ -0.49
Rom1P32958 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.01□□□□□ -0.49
Rom1P32958 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rom1P32958 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Rom1P32958 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Rom1P32958 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rom1P32958 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Gm13168-201ENSMUST00000121771 632 ntBASIC12.01□□□□□ -0.49
Rom1P32958 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Gm7507-201ENSMUST00000183053 1008 ntBASIC12.01□□□□□ -0.49
Rom1P32958 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.01□□□□□ -0.49
Rom1P32958 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Rom1P32958 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.01□□□□□ -0.49
Rom1P32958 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rom1P32958 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Rom1P32958 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Rom1P32958 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.01□□□□□ -0.49
Rom1P32958 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Rom1P32958 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.01□□□□□ -0.49
Rom1P32958 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12□□□□□ -0.49
Rom1P32958 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12□□□□□ -0.49
Rom1P32958 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC12□□□□□ -0.49
Rom1P32958 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Gm25406-201ENSMUST00000157599 105 ntBASIC12□□□□□ -0.49
Rom1P32958 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC12□□□□□ -0.49
Rom1P32958 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12□□□□□ -0.49
Rom1P32958 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12□□□□□ -0.49
Rom1P32958 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Gm30025-201ENSMUST00000218555 728 ntBASIC12□□□□□ -0.49
Rom1P32958 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Rom1P32958 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms