Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.11□□□□□ -0.15
Hoxc5P32043 Gm8655-201ENSMUST00000221159 852 ntBASIC14.11□□□□□ -0.15
Hoxc5P32043 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc5P32043 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc5P32043 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc5P32043 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc5P32043 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Hoxc5P32043 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hoxc5P32043 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Hoxc5P32043 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hoxc5P32043 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Efs-202ENSMUST00000227037 2540 ntBASIC14.09□□□□□ -0.15
Hoxc5P32043 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Gm18669-201ENSMUST00000216049 778 ntBASIC14.09□□□□□ -0.15
Hoxc5P32043 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.09□□□□□ -0.15
Hoxc5P32043 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Hoxc5P32043 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hoxc5P32043 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hoxc5P32043 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc5P32043 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc5P32043 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc5P32043 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc5P32043 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc5P32043 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hoxc5P32043 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Gm8344-201ENSMUST00000119813 856 ntBASIC14.08□□□□□ -0.16
Hoxc5P32043 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.08□□□□□ -0.16
Hoxc5P32043 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Gm7286-201ENSMUST00000182691 1007 ntBASIC14.08□□□□□ -0.16
Hoxc5P32043 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Hoxc5P32043 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Hoxc5P32043 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hoxc5P32043 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms