Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Pde6bP23440 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.56■□□□□ 0.24
Pde6bP23440 Gm7063-201ENSMUST00000186840 981 ntBASIC16.56■□□□□ 0.24
Pde6bP23440 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Pde6bP23440 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.56■□□□□ 0.24
Pde6bP23440 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.55■□□□□ 0.24
Pde6bP23440 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.55■□□□□ 0.24
Pde6bP23440 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.55■□□□□ 0.24
Pde6bP23440 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.55■□□□□ 0.24
Pde6bP23440 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Pde6bP23440 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Pde6bP23440 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.55■□□□□ 0.24
Pde6bP23440 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.55■□□□□ 0.24
Pde6bP23440 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Pde6bP23440 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pde6bP23440 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC16.54■□□□□ 0.24
Pde6bP23440 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Pde6bP23440 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.54■□□□□ 0.24
Pde6bP23440 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Gm13365-201ENSMUST00000121188 973 ntBASIC16.54■□□□□ 0.24
Pde6bP23440 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Mir6956-201ENSMUST00000183598 62 ntBASIC16.54■□□□□ 0.24
Pde6bP23440 Gm5312-201ENSMUST00000203728 547 ntBASIC16.54■□□□□ 0.24
Pde6bP23440 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.54■□□□□ 0.24
Pde6bP23440 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
Pde6bP23440 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Pde6bP23440 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Pde6bP23440 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.53■□□□□ 0.24
Pde6bP23440 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.53■□□□□ 0.24
Pde6bP23440 Gm13332-201ENSMUST00000120451 1398 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.53■□□□□ 0.24
Pde6bP23440 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Gm12008-201ENSMUST00000117791 755 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.53■□□□□ 0.24
Pde6bP23440 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Gm44335-201ENSMUST00000196879 141 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Gm44297-201ENSMUST00000198304 141 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Gm44346-201ENSMUST00000198851 141 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pde6bP23440 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Pde6bP23440 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Pde6bP23440 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
Pde6bP23440 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.53■□□□□ 0.24
Pde6bP23440 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms