Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Krt1P04104 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Krt1P04104 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Krt1P04104 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Krt1P04104 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt1P04104 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt1P04104 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Krt1P04104 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Krt1P04104 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Krt1P04104 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.37□□□□□ -0.11
Krt1P04104 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Krt1P04104 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.37□□□□□ -0.11
Krt1P04104 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Krt1P04104 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.37□□□□□ -0.11
Krt1P04104 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Krt1P04104 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt1P04104 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.37□□□□□ -0.11
Krt1P04104 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Krt1P04104 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Krt1P04104 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.36□□□□□ -0.11
Krt1P04104 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.36□□□□□ -0.11
Krt1P04104 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Krt1P04104 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt1P04104 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Gm23547-201ENSMUST00000158210 271 ntBASIC14.36□□□□□ -0.11
Krt1P04104 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt1P04104 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.36□□□□□ -0.11
Krt1P04104 Otx2os1-204ENSMUST00000227221 751 ntBASIC14.36□□□□□ -0.11
Krt1P04104 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Krt1P04104 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Krt1P04104 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Krt1P04104 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.36□□□□□ -0.11
Krt1P04104 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms