Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.83□□□□□ -0.04
ClppO88696 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
ClppO88696 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.83□□□□□ -0.04
ClppO88696 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.82□□□□□ -0.04
ClppO88696 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.82□□□□□ -0.04
ClppO88696 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Gm18489-201ENSMUST00000172565 551 ntBASIC14.82□□□□□ -0.04
ClppO88696 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Gm27397-201ENSMUST00000184997 107 ntBASIC14.82□□□□□ -0.04
ClppO88696 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC14.82□□□□□ -0.04
ClppO88696 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.82□□□□□ -0.04
ClppO88696 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC14.82□□□□□ -0.04
ClppO88696 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.82□□□□□ -0.04
ClppO88696 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClppO88696 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.82□□□□□ -0.04
ClppO88696 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
ClppO88696 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Mir3113-201ENSMUST00000175478 76 ntBASIC14.81□□□□□ -0.04
ClppO88696 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Gm7787-201ENSMUST00000216858 688 ntBASIC14.81□□□□□ -0.04
ClppO88696 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC14.81□□□□□ -0.04
ClppO88696 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.81□□□□□ -0.04
ClppO88696 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.81□□□□□ -0.04
ClppO88696 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClppO88696 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.8□□□□□ -0.04
ClppO88696 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.8□□□□□ -0.04
ClppO88696 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.8□□□□□ -0.04
ClppO88696 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.8□□□□□ -0.04
ClppO88696 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
ClppO88696 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
ClppO88696 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
ClppO88696 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
ClppO88696 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms