Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cldn1O88551 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cldn1O88551 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Cldn1O88551 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.01□□□□□ -0.33
Cldn1O88551 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cldn1O88551 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC13.01□□□□□ -0.33
Cldn1O88551 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cldn1O88551 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cldn1O88551 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.01□□□□□ -0.33
Cldn1O88551 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC13.01□□□□□ -0.33
Cldn1O88551 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.01□□□□□ -0.33
Cldn1O88551 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Gm7774-201ENSMUST00000200064 533 ntBASIC13.01□□□□□ -0.33
Cldn1O88551 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.01□□□□□ -0.33
Cldn1O88551 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.01□□□□□ -0.33
Cldn1O88551 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Cldn1O88551 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
Cldn1O88551 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Cldn1O88551 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cldn1O88551 Gm38042-201ENSMUST00000191614 5208 ntBASIC13□□□□□ -0.33
Cldn1O88551 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cldn1O88551 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Cldn1O88551 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13□□□□□ -0.33
Cldn1O88551 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13□□□□□ -0.33
Cldn1O88551 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cldn1O88551 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13□□□□□ -0.33
Cldn1O88551 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13□□□□□ -0.33
Cldn1O88551 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13□□□□□ -0.33
Cldn1O88551 AC125206.2-201ENSMUST00000217454 574 ntBASIC13□□□□□ -0.33
Cldn1O88551 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Cldn1O88551 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC13□□□□□ -0.33
Cldn1O88551 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cldn1O88551 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Cldn1O88551 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cldn1O88551 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.99□□□□□ -0.33
Cldn1O88551 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Cldn1O88551 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Cldn1O88551 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Cldn1O88551 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Cldn1O88551 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cldn1O88551 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Cldn1O88551 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC12.99□□□□□ -0.33
Cldn1O88551 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Gm27437-201ENSMUST00000183429 107 ntBASIC12.99□□□□□ -0.33
Cldn1O88551 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cldn1O88551 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.99□□□□□ -0.33
Cldn1O88551 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms