Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Cops6O88545 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC18.46■□□□□ 0.55
Cops6O88545 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cops6O88545 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Cops6O88545 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.46■□□□□ 0.55
Cops6O88545 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Gm6415-201ENSMUST00000118488 348 ntBASIC18.46■□□□□ 0.55
Cops6O88545 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Cops6O88545 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC18.46■□□□□ 0.55
Cops6O88545 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC18.46■□□□□ 0.55
Cops6O88545 Gm27618-201ENSMUST00000183671 60 ntBASIC18.46■□□□□ 0.55
Cops6O88545 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC18.46■□□□□ 0.55
Cops6O88545 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Cops6O88545 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cops6O88545 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.46■□□□□ 0.55
Cops6O88545 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC18.45■□□□□ 0.54
Cops6O88545 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Cops6O88545 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC18.45■□□□□ 0.54
Cops6O88545 Gm9824-201ENSMUST00000178707 561 ntBASIC18.45■□□□□ 0.54
Cops6O88545 Gm43767-201ENSMUST00000198933 381 ntBASIC18.45■□□□□ 0.54
Cops6O88545 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.45■□□□□ 0.54
Cops6O88545 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Cops6O88545 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC18.45■□□□□ 0.54
Cops6O88545 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cops6O88545 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Prob1-201ENSMUST00000097619 3021 ntBASIC18.44■□□□□ 0.54
Cops6O88545 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cops6O88545 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.44■□□□□ 0.54
Cops6O88545 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC18.44■□□□□ 0.54
Cops6O88545 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Cops6O88545 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cops6O88545 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Cops6O88545 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC18.44■□□□□ 0.54
Cops6O88545 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC18.44■□□□□ 0.54
Cops6O88545 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC18.44■□□□□ 0.54
Cops6O88545 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cops6O88545 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Cops6O88545 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cops6O88545 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.43■□□□□ 0.54
Cops6O88545 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC18.43■□□□□ 0.54
Cops6O88545 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
Cops6O88545 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Cops6O88545 Gm13015-201ENSMUST00000118674 204 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms