Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Cops4O88544 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Cops4O88544 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.04□□□□□ -0.16
Cops4O88544 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Gm9013-201ENSMUST00000132939 882 ntBASIC14.04□□□□□ -0.16
Cops4O88544 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Cops4O88544 Gm6623-201ENSMUST00000173570 544 ntBASIC14.04□□□□□ -0.16
Cops4O88544 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.04□□□□□ -0.16
Cops4O88544 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Cops4O88544 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Cops4O88544 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Cops4O88544 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Cops4O88544 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Cops4O88544 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.03□□□□□ -0.16
Cops4O88544 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Cops4O88544 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Cops4O88544 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.03□□□□□ -0.16
Cops4O88544 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.03□□□□□ -0.16
Cops4O88544 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.03□□□□□ -0.16
Cops4O88544 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.03□□□□□ -0.16
Cops4O88544 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Cops4O88544 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Cops4O88544 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Cops4O88544 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.02□□□□□ -0.16
Cops4O88544 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Cops4O88544 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Cops4O88544 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.02□□□□□ -0.16
Cops4O88544 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cops4O88544 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Cops4O88544 Gm10231-201ENSMUST00000181584 441 ntBASIC14.02□□□□□ -0.17
Cops4O88544 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Gm10175-202ENSMUST00000208752 441 ntBASIC14.02□□□□□ -0.17
Cops4O88544 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Cops4O88544 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Cops4O88544 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Cops4O88544 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Cops4O88544 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms