Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rnf13O54965 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.78□□□□□ -0.2
Rnf13O54965 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Rnf13O54965 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Rnf13O54965 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Rnf13O54965 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.78□□□□□ -0.2
Rnf13O54965 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.78□□□□□ -0.2
Rnf13O54965 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Rnf13O54965 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Rnf13O54965 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.78□□□□□ -0.2
Rnf13O54965 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Rnf13O54965 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf13O54965 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf13O54965 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf13O54965 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Rnf13O54965 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.77□□□□□ -0.21
Rnf13O54965 Gm15794-201ENSMUST00000120182 631 ntBASIC13.77□□□□□ -0.21
Rnf13O54965 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.77□□□□□ -0.21
Rnf13O54965 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Rnf13O54965 AC153794.1-201ENSMUST00000169148 126 ntBASIC13.77□□□□□ -0.21
Rnf13O54965 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.77□□□□□ -0.21
Rnf13O54965 Gm29518-201ENSMUST00000190858 372 ntBASIC13.77□□□□□ -0.21
Rnf13O54965 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC13.77□□□□□ -0.21
Rnf13O54965 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.21
Rnf13O54965 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.77□□□□□ -0.21
Rnf13O54965 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Rnf13O54965 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rnf13O54965 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Grk6-207ENSMUST00000225925 2769 ntBASIC13.76□□□□□ -0.21
Rnf13O54965 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rnf13O54965 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.76□□□□□ -0.21
Rnf13O54965 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rnf13O54965 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.76□□□□□ -0.21
Rnf13O54965 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.76□□□□□ -0.21
Rnf13O54965 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Rnf13O54965 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Rnf13O54965 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Rnf13O54965 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Rnf13O54965 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.76□□□□□ -0.21
Rnf13O54965 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Rnf13O54965 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rnf13O54965 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.75□□□□□ -0.21
Rnf13O54965 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms