Protein–RNA interactions for Protein: O35595

Ptch2, Protein patched homolog 2, mousemouse

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch2O35595 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ptch2O35595 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ptch2O35595 Gm14722-201ENSMUST00000118943 689 ntBASIC15.54■□□□□ 0.08
Ptch2O35595 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.54■□□□□ 0.08
Ptch2O35595 Rprl2-201ENSMUST00000157150 290 ntBASIC15.54■□□□□ 0.08
Ptch2O35595 AA543401-201ENSMUST00000164248 1269 ntBASIC15.54■□□□□ 0.08
Ptch2O35595 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ptch2O35595 Gm25948-201ENSMUST00000175334 112 ntBASIC15.54■□□□□ 0.08
Ptch2O35595 Gm43125-201ENSMUST00000201724 730 ntBASIC15.54■□□□□ 0.08
Ptch2O35595 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC15.54■□□□□ 0.08
Ptch2O35595 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Ptch2O35595 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ptch2O35595 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ptch2O35595 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.53■□□□□ 0.08
Ptch2O35595 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ptch2O35595 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ptch2O35595 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 AC126250.1-201ENSMUST00000228343 1768 ntBASIC15.53■□□□□ 0.08
Ptch2O35595 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Ptch2O35595 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.53■□□□□ 0.08
Ptch2O35595 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.53■□□□□ 0.08
Ptch2O35595 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.53■□□□□ 0.08
Ptch2O35595 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ptch2O35595 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ptch2O35595 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ptch2O35595 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ptch2O35595 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.52■□□□□ 0.08
Ptch2O35595 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Ptch2O35595 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.08
Ptch2O35595 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.52■□□□□ 0.08
Ptch2O35595 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ptch2O35595 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.52■□□□□ 0.08
Ptch2O35595 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.52■□□□□ 0.08
Ptch2O35595 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.52■□□□□ 0.08
Ptch2O35595 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ptch2O35595 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ptch2O35595 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ptch2O35595 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ptch2O35595 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Ptch2O35595 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ptch2O35595 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Ptch2O35595 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Gm14057-201ENSMUST00000120631 482 ntBASIC15.51■□□□□ 0.07
Ptch2O35595 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.51■□□□□ 0.07
Ptch2O35595 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.51■□□□□ 0.07
Ptch2O35595 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.51■□□□□ 0.07
Ptch2O35595 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC15.51■□□□□ 0.07
Ptch2O35595 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ptch2O35595 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms