Protein–RNA interactions for Protein: O35218

Cpsf2, Cleavage and polyadenylation specificity factor subunit 2, mousemouse

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf2O35218 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Cpsf2O35218 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.27■□□□□ 0.2
Cpsf2O35218 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Cpsf2O35218 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf2O35218 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf2O35218 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Cpsf2O35218 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Cpsf2O35218 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.26■□□□□ 0.19
Cpsf2O35218 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Cpsf2O35218 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.26■□□□□ 0.19
Cpsf2O35218 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cpsf2O35218 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.25■□□□□ 0.19
Cpsf2O35218 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.25■□□□□ 0.19
Cpsf2O35218 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
Cpsf2O35218 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.25■□□□□ 0.19
Cpsf2O35218 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.25■□□□□ 0.19
Cpsf2O35218 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.25■□□□□ 0.19
Cpsf2O35218 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cpsf2O35218 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cpsf2O35218 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Gm7935-201ENSMUST00000100555 1278 ntBASIC16.24■□□□□ 0.19
Cpsf2O35218 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.24■□□□□ 0.19
Cpsf2O35218 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.24■□□□□ 0.19
Cpsf2O35218 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.24■□□□□ 0.19
Cpsf2O35218 AC153889.1-201ENSMUST00000219257 330 ntBASIC16.24■□□□□ 0.19
Cpsf2O35218 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cpsf2O35218 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Cpsf2O35218 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Cpsf2O35218 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cpsf2O35218 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf2O35218 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf2O35218 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cpsf2O35218 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cpsf2O35218 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf2O35218 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cpsf2O35218 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf2O35218 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf2O35218 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf2O35218 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cpsf2O35218 Gm14722-201ENSMUST00000118943 689 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms