Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trove2O08848 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Trove2O08848 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.62■□□□□ 0.09
Trove2O08848 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trove2O08848 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC15.62■□□□□ 0.09
Trove2O08848 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trove2O08848 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
Trove2O08848 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.62■□□□□ 0.09
Trove2O08848 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trove2O08848 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.62■□□□□ 0.09
Trove2O08848 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trove2O08848 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trove2O08848 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trove2O08848 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Trove2O08848 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.61■□□□□ 0.09
Trove2O08848 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.61■□□□□ 0.09
Trove2O08848 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.61■□□□□ 0.09
Trove2O08848 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trove2O08848 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trove2O08848 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.61■□□□□ 0.09
Trove2O08848 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trove2O08848 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.6■□□□□ 0.09
Trove2O08848 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Trove2O08848 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Trove2O08848 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.6■□□□□ 0.09
Trove2O08848 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trove2O08848 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.59■□□□□ 0.09
Trove2O08848 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.59■□□□□ 0.09
Trove2O08848 Sorbs3-204ENSMUST00000227929 2460 ntBASIC15.59■□□□□ 0.09
Trove2O08848 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Trove2O08848 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Trove2O08848 Efs-202ENSMUST00000227037 2540 ntBASIC15.59■□□□□ 0.09
Trove2O08848 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trove2O08848 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms