Protein–RNA interactions for Protein: F6UCX4

Sptbn5, Spectrin beta, non-erythrocytic 5 (Fragment), mousemouse

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn5F6UCX4 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Gm12008-201ENSMUST00000117791 755 ntBASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Gm13312-201ENSMUST00000119631 718 ntBASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Gm19164-201ENSMUST00000210667 640 ntBASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Celf4-206ENSMUST00000224553 1729 ntBASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sptbn5F6UCX4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Sptbn5F6UCX4 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sptbn5F6UCX4 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Vti1a-206ENSMUST00000225529 1244 ntBASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sptbn5F6UCX4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Sptbn5F6UCX4 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms