Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Gm21451-201ENSMUST00000111062 2775 ntBASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gm12887B1AVM1 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Gm13168-201ENSMUST00000121771 632 ntBASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gm12887B1AVM1 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Gm12887B1AVM1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Gm10653-202ENSMUST00000139570 835 ntBASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Gm37722-201ENSMUST00000193757 208 ntBASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Gm12887B1AVM1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms