Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cfap99A0A140LIX9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Gm27494-201ENSMUST00000184735 189 ntBASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cfap99A0A140LIX9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cfap99A0A140LIX9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cfap99A0A140LIX9 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Gm17968-201ENSMUST00000194902 784 ntBASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cfap99A0A140LIX9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cfap99A0A140LIX9 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms