Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.72□□□□□ -0.53
Trbv3A0A0A6YYE2 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Gm715-201ENSMUST00000117865 831 ntBASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 AC135963.1-201ENSMUST00000211640 717 ntBASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trbv3A0A0A6YYE2 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trbv3A0A0A6YYE2 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Carlr-201ENSMUST00000181515 2574 ntBASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trbv3A0A0A6YYE2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trbv3A0A0A6YYE2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms