Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm27430-201ENSMUST00000184585 107 ntBASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm44333-201ENSMUST00000197168 107 ntBASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.98□□□□□ -0.17
Ighv1-42A0A0A6YY38 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm2810-201ENSMUST00000118681 990 ntBASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 AC163637.1-201ENSMUST00000215491 1894 ntBASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ighv1-42A0A0A6YY38 Gm22175-201ENSMUST00000175007 78 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms