Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav6d-5A0A075B6B9 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 CT025689.6-201ENSMUST00000224991 1104 ntBASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.26□□□□□ -0.45
Trav6d-5A0A075B6B9 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Carlr-201ENSMUST00000181515 2574 ntBASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Mir770-201ENSMUST00000103252 94 ntBASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm10812-201ENSMUST00000099864 546 ntBASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trav6d-5A0A075B6B9 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trav6d-5A0A075B6B9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms