Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trav6-5A0A075B6B5 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Gm2274-201ENSMUST00000184539 609 ntBASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Trav6-5A0A075B6B5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Mir1668-201ENSMUST00000184114 107 ntBASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Gm44981-201ENSMUST00000205549 1943 ntBASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Trav6-5A0A075B6B5 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms