Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Gm45058-201ENSMUST00000205810 766 ntBASIC11.51□□□□□ -0.57
Trav16nA0A075B634 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Gm9987-201ENSMUST00000069768 567 ntBASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trav16nA0A075B634 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm11355-201ENSMUST00000121120 306 ntBASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm18959-201ENSMUST00000208954 655 ntBASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Trav16nA0A075B634 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Pcgf5-211ENSMUST00000225920 6443 ntBASIC11.49□□□□□ -0.57
Trav16nA0A075B634 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Gm30437-201ENSMUST00000206086 1201 ntBASIC11.49□□□□□ -0.57
Trav16nA0A075B634 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Gm21559-201ENSMUST00000220638 855 ntBASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Gm8587-201ENSMUST00000076538 843 ntBASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Zkscan4-202ENSMUST00000225845 1506 ntBASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Trav16nA0A075B634 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms