Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Gm29707-201ENSMUST00000196325 491 ntBASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Gm7367-201ENSMUST00000057611 492 ntBASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Trav4n-4A0A075B615 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Gm11249-201ENSMUST00000117071 859 ntBASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Trav4n-4A0A075B615 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Gm44981-201ENSMUST00000205549 1943 ntBASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Trav4n-4A0A075B615 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms