Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Phf1Q9Z1B8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Phf1Q9Z1B8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.6■□□□□ 0.89
Phf1Q9Z1B8 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phf1Q9Z1B8 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Phf1Q9Z1B8 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.6■□□□□ 0.89
Phf1Q9Z1B8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Phf1Q9Z1B8 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Phf1Q9Z1B8 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Phf1Q9Z1B8 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Phf1Q9Z1B8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Phf1Q9Z1B8 Gm27502-201ENSMUST00000183495 199 ntBASIC20.58■□□□□ 0.89
Phf1Q9Z1B8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phf1Q9Z1B8 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Phf1Q9Z1B8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Phf1Q9Z1B8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Phf1Q9Z1B8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phf1Q9Z1B8 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phf1Q9Z1B8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phf1Q9Z1B8 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.57■□□□□ 0.88
Phf1Q9Z1B8 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phf1Q9Z1B8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Phf1Q9Z1B8 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Phf1Q9Z1B8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phf1Q9Z1B8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Phf1Q9Z1B8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phf1Q9Z1B8 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.54■□□□□ 0.88
Phf1Q9Z1B8 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.54■□□□□ 0.88
Phf1Q9Z1B8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.54■□□□□ 0.88
Phf1Q9Z1B8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Phf1Q9Z1B8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Phf1Q9Z1B8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phf1Q9Z1B8 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phf1Q9Z1B8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Phf1Q9Z1B8 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.52■□□□□ 0.88
Phf1Q9Z1B8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Phf1Q9Z1B8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.51■□□□□ 0.87
Phf1Q9Z1B8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Phf1Q9Z1B8 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phf1Q9Z1B8 Terc-201ENSMUST00000082862 423 ntBASIC20.5■□□□□ 0.87
Phf1Q9Z1B8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Phf1Q9Z1B8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Phf1Q9Z1B8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Phf1Q9Z1B8 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Phf1Q9Z1B8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Gm14523-201ENSMUST00000117260 558 ntBASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Phf1Q9Z1B8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Phf1Q9Z1B8 Gm7332-201ENSMUST00000118351 454 ntBASIC20.45■□□□□ 0.86
Phf1Q9Z1B8 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Phf1Q9Z1B8 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phf1Q9Z1B8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phf1Q9Z1B8 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Phf1Q9Z1B8 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Phf1Q9Z1B8 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms