Protein–RNA interactions for Protein: Q9JM58

Crlf1, Cytokine receptor-like factor 1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf1Q9JM58 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Crlf1Q9JM58 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Crlf1Q9JM58 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Crlf1Q9JM58 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.39■□□□□ 0.53
Crlf1Q9JM58 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crlf1Q9JM58 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Crlf1Q9JM58 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.38■□□□□ 0.53
Crlf1Q9JM58 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.38■□□□□ 0.53
Crlf1Q9JM58 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.38■□□□□ 0.53
Crlf1Q9JM58 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Crlf1Q9JM58 Gm10232-201ENSMUST00000089221 720 ntBASIC18.38■□□□□ 0.53
Crlf1Q9JM58 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Crlf1Q9JM58 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crlf1Q9JM58 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crlf1Q9JM58 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Crlf1Q9JM58 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Crlf1Q9JM58 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crlf1Q9JM58 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crlf1Q9JM58 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Crlf1Q9JM58 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.36■□□□□ 0.53
Crlf1Q9JM58 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.36■□□□□ 0.53
Crlf1Q9JM58 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Crlf1Q9JM58 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Crlf1Q9JM58 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crlf1Q9JM58 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Crlf1Q9JM58 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crlf1Q9JM58 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Crlf1Q9JM58 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Crlf1Q9JM58 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crlf1Q9JM58 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Crlf1Q9JM58 Gm13241-201ENSMUST00000094493 780 ntBASIC18.34■□□□□ 0.53
Crlf1Q9JM58 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Crlf1Q9JM58 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Crlf1Q9JM58 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.33■□□□□ 0.52
Crlf1Q9JM58 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Crlf1Q9JM58 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.33■□□□□ 0.52
Crlf1Q9JM58 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Crlf1Q9JM58 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Crlf1Q9JM58 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Crlf1Q9JM58 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Crlf1Q9JM58 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Crlf1Q9JM58 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Crlf1Q9JM58 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Crlf1Q9JM58 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Crlf1Q9JM58 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Crlf1Q9JM58 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Crlf1Q9JM58 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Crlf1Q9JM58 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
Crlf1Q9JM58 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Crlf1Q9JM58 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Crlf1Q9JM58 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.26■□□□□ 0.51
Crlf1Q9JM58 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Crlf1Q9JM58 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
Crlf1Q9JM58 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Crlf1Q9JM58 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crlf1Q9JM58 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.25■□□□□ 0.51
Crlf1Q9JM58 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.25■□□□□ 0.51
Crlf1Q9JM58 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
Crlf1Q9JM58 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crlf1Q9JM58 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Crlf1Q9JM58 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.23■□□□□ 0.51
Crlf1Q9JM58 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Crlf1Q9JM58 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.22■□□□□ 0.51
Crlf1Q9JM58 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.22■□□□□ 0.51
Crlf1Q9JM58 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.22■□□□□ 0.51
Crlf1Q9JM58 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Crlf1Q9JM58 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 103.4 ms