Protein–RNA interactions for Protein: Q9JJT0

Rcl1, RNA 3'-terminal phosphate cyclase-like protein, mousemouse

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcl1Q9JJT0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rcl1Q9JJT0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rcl1Q9JJT0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.86■□□□□ 0.61
Rcl1Q9JJT0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rcl1Q9JJT0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rcl1Q9JJT0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 Gm30023-201ENSMUST00000197970 889 ntBASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rcl1Q9JJT0 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC18.84■□□□□ 0.61
Rcl1Q9JJT0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.83■□□□□ 0.6
Rcl1Q9JJT0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rcl1Q9JJT0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rcl1Q9JJT0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rcl1Q9JJT0 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rcl1Q9JJT0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rcl1Q9JJT0 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rcl1Q9JJT0 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rcl1Q9JJT0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rcl1Q9JJT0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.82■□□□□ 0.6
Rcl1Q9JJT0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rcl1Q9JJT0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.82■□□□□ 0.6
Rcl1Q9JJT0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.81■□□□□ 0.6
Rcl1Q9JJT0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Rcl1Q9JJT0 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rcl1Q9JJT0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.81■□□□□ 0.6
Rcl1Q9JJT0 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Rcl1Q9JJT0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rcl1Q9JJT0 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.8■□□□□ 0.6
Rcl1Q9JJT0 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rcl1Q9JJT0 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rcl1Q9JJT0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Gm7432-201ENSMUST00000210343 879 ntBASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rcl1Q9JJT0 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.78■□□□□ 0.6
Rcl1Q9JJT0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rcl1Q9JJT0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rcl1Q9JJT0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
Rcl1Q9JJT0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Rcl1Q9JJT0 Gm5987-201ENSMUST00000196433 1151 ntBASIC18.77■□□□□ 0.6
Rcl1Q9JJT0 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
Rcl1Q9JJT0 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rcl1Q9JJT0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rcl1Q9JJT0 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
Rcl1Q9JJT0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rcl1Q9JJT0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Rcl1Q9JJT0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rcl1Q9JJT0 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rcl1Q9JJT0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rcl1Q9JJT0 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rcl1Q9JJT0 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rcl1Q9JJT0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Rcl1Q9JJT0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Rcl1Q9JJT0 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rcl1Q9JJT0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rcl1Q9JJT0 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rcl1Q9JJT0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.74■□□□□ 0.59
Rcl1Q9JJT0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rcl1Q9JJT0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rcl1Q9JJT0 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rcl1Q9JJT0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rcl1Q9JJT0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rcl1Q9JJT0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rcl1Q9JJT0 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rcl1Q9JJT0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Rcl1Q9JJT0 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Rcl1Q9JJT0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
Rcl1Q9JJT0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rcl1Q9JJT0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Rcl1Q9JJT0 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms