Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Barx1Q9ER42 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Barx1Q9ER42 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Barx1Q9ER42 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Barx1Q9ER42 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Barx1Q9ER42 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Barx1Q9ER42 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Barx1Q9ER42 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Barx1Q9ER42 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.37■□□□□ 0.85
Barx1Q9ER42 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Barx1Q9ER42 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Barx1Q9ER42 Gm45102-201ENSMUST00000207427 857 ntBASIC20.37■□□□□ 0.85
Barx1Q9ER42 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Barx1Q9ER42 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Barx1Q9ER42 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Barx1Q9ER42 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Barx1Q9ER42 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.36■□□□□ 0.85
Barx1Q9ER42 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Barx1Q9ER42 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Barx1Q9ER42 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.35■□□□□ 0.85
Barx1Q9ER42 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.35■□□□□ 0.85
Barx1Q9ER42 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Barx1Q9ER42 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Barx1Q9ER42 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Barx1Q9ER42 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Barx1Q9ER42 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.33■□□□□ 0.85
Barx1Q9ER42 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Barx1Q9ER42 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Barx1Q9ER42 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
Barx1Q9ER42 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Barx1Q9ER42 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
Barx1Q9ER42 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Barx1Q9ER42 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Barx1Q9ER42 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Barx1Q9ER42 Gm13238-201ENSMUST00000117655 780 ntBASIC20.32■□□□□ 0.84
Barx1Q9ER42 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Barx1Q9ER42 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.32■□□□□ 0.84
Barx1Q9ER42 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Barx1Q9ER42 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Barx1Q9ER42 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Barx1Q9ER42 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Barx1Q9ER42 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Barx1Q9ER42 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Barx1Q9ER42 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Barx1Q9ER42 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Barx1Q9ER42 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Barx1Q9ER42 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Barx1Q9ER42 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.3■□□□□ 0.84
Barx1Q9ER42 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Barx1Q9ER42 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Barx1Q9ER42 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.29■□□□□ 0.84
Barx1Q9ER42 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Barx1Q9ER42 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Barx1Q9ER42 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Barx1Q9ER42 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.28■□□□□ 0.84
Barx1Q9ER42 Gm14117-201ENSMUST00000122417 843 ntBASIC20.28■□□□□ 0.84
Barx1Q9ER42 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.28■□□□□ 0.84
Barx1Q9ER42 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Barx1Q9ER42 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Barx1Q9ER42 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.27■□□□□ 0.84
Barx1Q9ER42 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Barx1Q9ER42 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Barx1Q9ER42 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Barx1Q9ER42 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.26■□□□□ 0.83
Barx1Q9ER42 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Barx1Q9ER42 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.25■□□□□ 0.83
Barx1Q9ER42 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Barx1Q9ER42 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Barx1Q9ER42 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Barx1Q9ER42 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.25■□□□□ 0.83
Barx1Q9ER42 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Barx1Q9ER42 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Barx1Q9ER42 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Barx1Q9ER42 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Barx1Q9ER42 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Barx1Q9ER42 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Barx1Q9ER42 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Barx1Q9ER42 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Barx1Q9ER42 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Barx1Q9ER42 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Barx1Q9ER42 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.21■□□□□ 0.83
Barx1Q9ER42 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Barx1Q9ER42 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.21■□□□□ 0.83
Barx1Q9ER42 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.21■□□□□ 0.83
Barx1Q9ER42 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms