Protein–RNA interactions for Protein: Q9D8B4

Ndufa11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, mousemouse

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufa11Q9D8B4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ndufa11Q9D8B4 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ndufa11Q9D8B4 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ndufa11Q9D8B4 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ndufa11Q9D8B4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Ndufa11Q9D8B4 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ndufa11Q9D8B4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ndufa11Q9D8B4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.88■□□□□ 0.77
Ndufa11Q9D8B4 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ndufa11Q9D8B4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ndufa11Q9D8B4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Ndufa11Q9D8B4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Ndufa11Q9D8B4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.87■□□□□ 0.77
Ndufa11Q9D8B4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.87■□□□□ 0.77
Ndufa11Q9D8B4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ndufa11Q9D8B4 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ndufa11Q9D8B4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.85■□□□□ 0.77
Ndufa11Q9D8B4 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.85■□□□□ 0.77
Ndufa11Q9D8B4 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Ndufa11Q9D8B4 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.85■□□□□ 0.77
Ndufa11Q9D8B4 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ndufa11Q9D8B4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ndufa11Q9D8B4 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ndufa11Q9D8B4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ndufa11Q9D8B4 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.83■□□□□ 0.77
Ndufa11Q9D8B4 Gm9959-201ENSMUST00000068277 390 ntBASIC19.83■□□□□ 0.77
Ndufa11Q9D8B4 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.82■□□□□ 0.76
Ndufa11Q9D8B4 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndufa11Q9D8B4 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ndufa11Q9D8B4 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ndufa11Q9D8B4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ndufa11Q9D8B4 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ndufa11Q9D8B4 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
Ndufa11Q9D8B4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufa11Q9D8B4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufa11Q9D8B4 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufa11Q9D8B4 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufa11Q9D8B4 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ndufa11Q9D8B4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufa11Q9D8B4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.79■□□□□ 0.76
Ndufa11Q9D8B4 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufa11Q9D8B4 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.79■□□□□ 0.76
Ndufa11Q9D8B4 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufa11Q9D8B4 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ndufa11Q9D8B4 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ndufa11Q9D8B4 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ndufa11Q9D8B4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ndufa11Q9D8B4 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.77■□□□□ 0.76
Ndufa11Q9D8B4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndufa11Q9D8B4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ndufa11Q9D8B4 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ndufa11Q9D8B4 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ndufa11Q9D8B4 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.75■□□□□ 0.75
Ndufa11Q9D8B4 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Ndufa11Q9D8B4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ndufa11Q9D8B4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ndufa11Q9D8B4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ndufa11Q9D8B4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ndufa11Q9D8B4 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.71■□□□□ 0.75
Ndufa11Q9D8B4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ndufa11Q9D8B4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.71■□□□□ 0.75
Ndufa11Q9D8B4 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndufa11Q9D8B4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndufa11Q9D8B4 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Ndufa11Q9D8B4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC19.69■□□□□ 0.74
Ndufa11Q9D8B4 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndufa11Q9D8B4 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Ndufa11Q9D8B4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufa11Q9D8B4 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC19.67■□□□□ 0.74
Ndufa11Q9D8B4 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.67■□□□□ 0.74
Ndufa11Q9D8B4 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufa11Q9D8B4 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ndufa11Q9D8B4 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms