Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.66■■□□□ 1.06
Sh2d4aQ9D7V1 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.66■■□□□ 1.06
Sh2d4aQ9D7V1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.66■■□□□ 1.06
Sh2d4aQ9D7V1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4aQ9D7V1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sh2d4aQ9D7V1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Nkain2-201ENSMUST00000092602 558 ntBASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Sh2d4aQ9D7V1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Sh2d4aQ9D7V1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sh2d4aQ9D7V1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Sh2d4aQ9D7V1 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Sh2d4aQ9D7V1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Sh2d4aQ9D7V1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sh2d4aQ9D7V1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4aQ9D7V1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.62■■□□□ 1.05
Sh2d4aQ9D7V1 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4aQ9D7V1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4aQ9D7V1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sh2d4aQ9D7V1 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
Sh2d4aQ9D7V1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Sh2d4aQ9D7V1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh2d4aQ9D7V1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sh2d4aQ9D7V1 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Sh2d4aQ9D7V1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Sh2d4aQ9D7V1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Sh2d4aQ9D7V1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh2d4aQ9D7V1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.59■■□□□ 1.05
Sh2d4aQ9D7V1 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.59■■□□□ 1.05
Sh2d4aQ9D7V1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sh2d4aQ9D7V1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh2d4aQ9D7V1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sh2d4aQ9D7V1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sh2d4aQ9D7V1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh2d4aQ9D7V1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sh2d4aQ9D7V1 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Sh2d4aQ9D7V1 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Sh2d4aQ9D7V1 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh2d4aQ9D7V1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh2d4aQ9D7V1 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh2d4aQ9D7V1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Sh2d4aQ9D7V1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sh2d4aQ9D7V1 Gm37136-201ENSMUST00000194368 194 ntBASIC21.56■■□□□ 1.04
Sh2d4aQ9D7V1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.56■■□□□ 1.04
Sh2d4aQ9D7V1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d4aQ9D7V1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d4aQ9D7V1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.56■■□□□ 1.04
Sh2d4aQ9D7V1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Sh2d4aQ9D7V1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d4aQ9D7V1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Sh2d4aQ9D7V1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d4aQ9D7V1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d4aQ9D7V1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sh2d4aQ9D7V1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC21.54■■□□□ 1.04
Sh2d4aQ9D7V1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh2d4aQ9D7V1 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sh2d4aQ9D7V1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
Sh2d4aQ9D7V1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2d4aQ9D7V1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC21.53■■□□□ 1.04
Sh2d4aQ9D7V1 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2d4aQ9D7V1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2d4aQ9D7V1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sh2d4aQ9D7V1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.53■■□□□ 1.04
Sh2d4aQ9D7V1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.52■■□□□ 1.04
Sh2d4aQ9D7V1 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh2d4aQ9D7V1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC21.51■■□□□ 1.03
Sh2d4aQ9D7V1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC21.51■■□□□ 1.03
Sh2d4aQ9D7V1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.51■■□□□ 1.03
Sh2d4aQ9D7V1 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh2d4aQ9D7V1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh2d4aQ9D7V1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh2d4aQ9D7V1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh2d4aQ9D7V1 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC21.49■■□□□ 1.03
Sh2d4aQ9D7V1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms