Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.52■■□□□ 1.04
Upk1aQ9D132 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Upk1aQ9D132 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upk1aQ9D132 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Upk1aQ9D132 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
Upk1aQ9D132 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Upk1aQ9D132 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
Upk1aQ9D132 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upk1aQ9D132 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Upk1aQ9D132 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Upk1aQ9D132 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Upk1aQ9D132 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Upk1aQ9D132 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.48■■□□□ 1.03
Upk1aQ9D132 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Upk1aQ9D132 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upk1aQ9D132 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Upk1aQ9D132 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Upk1aQ9D132 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.46■■□□□ 1.03
Upk1aQ9D132 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Upk1aQ9D132 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Upk1aQ9D132 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Upk1aQ9D132 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upk1aQ9D132 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upk1aQ9D132 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upk1aQ9D132 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Upk1aQ9D132 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Upk1aQ9D132 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Upk1aQ9D132 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.43■■□□□ 1.02
Upk1aQ9D132 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.42■■□□□ 1.02
Upk1aQ9D132 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upk1aQ9D132 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Upk1aQ9D132 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.42■■□□□ 1.02
Upk1aQ9D132 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.42■■□□□ 1.02
Upk1aQ9D132 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Upk1aQ9D132 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Upk1aQ9D132 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Upk1aQ9D132 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upk1aQ9D132 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upk1aQ9D132 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upk1aQ9D132 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Upk1aQ9D132 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Upk1aQ9D132 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upk1aQ9D132 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.01
Upk1aQ9D132 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upk1aQ9D132 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Upk1aQ9D132 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk1aQ9D132 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Upk1aQ9D132 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk1aQ9D132 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk1aQ9D132 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
Upk1aQ9D132 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Upk1aQ9D132 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.37■■□□□ 1.01
Upk1aQ9D132 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Upk1aQ9D132 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upk1aQ9D132 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.36■■□□□ 1.01
Upk1aQ9D132 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Upk1aQ9D132 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
Upk1aQ9D132 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upk1aQ9D132 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.35■■□□□ 1.01
Upk1aQ9D132 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Upk1aQ9D132 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk1aQ9D132 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.34■■□□□ 1.01
Upk1aQ9D132 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk1aQ9D132 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Upk1aQ9D132 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upk1aQ9D132 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Upk1aQ9D132 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upk1aQ9D132 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Upk1aQ9D132 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upk1aQ9D132 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Upk1aQ9D132 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.33■■□□□ 1
Upk1aQ9D132 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.32■■□□□ 1
Upk1aQ9D132 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Upk1aQ9D132 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Upk1aQ9D132 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.32■■□□□ 1
Upk1aQ9D132 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk1aQ9D132 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Upk1aQ9D132 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.31■■□□□ 1
Upk1aQ9D132 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Upk1aQ9D132 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC21.31■■□□□ 1
Upk1aQ9D132 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.31■■□□□ 1
Upk1aQ9D132 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms